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L1 element (gi # and coordinates) | L1 structure | Class | TSDs | pA signal | polyA tail (bp) | Transduced segment length (bp) | |||
Length (bp) | ORF1 | ORF2 | PolyA tail (bp) | ||||||
1279499, 11400 .. 17418 | 6019 | -- | -- | 25 | 1 | AAGAAAGAGCCAA | ATTAAA | 27 | 479 |
1669380, (16606 .. 22620) | 6015 | -- | -- | 24 | 1 | AGAAATTGTC | ATTAAA | 17 | 89 |
2275172, (73720 .. 79740) | 6021 | + | -- | 22 | 1 | AGAAATCTGATTTGA | AATAAA | 13 | 975 |
2588618, (59187 .. 65202) | 6016 | + | -- | 27 | 1 | GAAATTTTTCATC | AATAAA | 12 | 337 |
2588627, 131175 .. 137191 | 6017 | -- | + | 14 | 1 | AAAAATTTACTGTCTA | AATAAA | 10 | 455 |
2809267, (11716 .. 17735) | 6020 | + | + | 47 | 1 | AAAAAAAATCACCA | AATAAA | 15 | 137 |
2853183, 4261 .. 10276 | 6016 | + | + | 36 | 1 | AAAGAAACTGAAGAGG | AATAAA | 25 | 175 |
3319674, 61629 .. 67639 | 6011 | + | -- | 16 | 1 | AAAGAAAAAATG | AATAAA | 17 | 272 |
3810569, 21041 .. 27057 | 6017 | + | -- | 24 | 1 | AGAAGCA | ATTAAA | 14 | 821 |
3845408, (22572 .. 28582) | 6011 | -- | -- | 17 | 1 | AGAATCTGACCTTCC | AATAAA | 13 | 460 |
2076718, 29372 .. 35393 | 6022 | -- | -- | 18 | 2 | AAGAAAGAGAATA | -- | 9 | 356 |
3288437, 65129 .. 71148 | 6020 | + | -- | 16 | 2 | AAAGAACACCTGGG | -- | 11 | 52 |
3522964, (24909 .. 30926) | 6018 | + | + | 61 | 2 | AAAAAACACAGTGAA | -- | 14 | 119 |
4006838, 117572 .. 123596 | 6025 | + | -- | 28 | 2 | AGAAGAAATG | -- | 22 | 36 |
3421083, 114651 .. 120654 | 6004 | -- | -- | 37 | 3 | AATGTTTA | AATAAA | 28 | 16 |
3510243, (4788 .. 10794) | 6007 | -- | -- | 16 | 3 | AAATAGT[T/C]GAAGA | AATAAA | 21 | 7 |
3808075, 6601 .. 12628 | 6028 | + | + | 23 | 3 | AAAAAGGAGCCCGG | AATAAA | 18 | 11 |
3873180, 114223 .. 120240 | 6018 | + | -- | 26 | 3 | AAGATTTTGTG | AATAAA | 25 | 10 |
3928116, 61076 .. 67082 | 6007 | -- | -- | 18 | 3 | AGAAACTTGGAACACA | AATAAA | 6 | 8 |
3953485, 108923 .. 114934 | 6012 | -- | -- | 31 | 3 | AAGCAATTTGT | -- | 17 | 26 |
4107187, 91010 .. 97031 | 6022 | -- | -- | 9 | 3 | AAACAGTATTTTCCCT | AATAAA | 8 | 13 |